List Analysis for TFs for which a PWM is available (129 Genes)
Gene > primaryIdentifier ? Gene > secondaryIdentifier ? Gene > symbol Gene > name ? Gene > length ? Gene > cytoLocation Gene > finalCallNumeric ? Gene > finalCallString ? Gene > hasPWM ? Gene > isChromatin ? Gene > comment ?
FBgn0000014 CG10325 abd-A abdominal A   22421   89E2-89E2   1   yes   yes   [no value] [no value]
FBgn0000015 CG11648 Abd-B Abdominal B   45027   89E4-89E5   1   yes   yes   [no value] [no value]
FBgn0000054 CG15845 Adf1 Adh transcription factor 1   5819   42C3-42C3   1   yes   yes   [no value] [no value]
FBgn0000061 CG3935 al aristaless   9324   21C1-21C1   5   yes   yes   [no value] [no value]
FBgn0000099 CG8376 ap apterous   20629   41F8-41F8   1   yes   yes   [no value] [no value]
FBgn0000157 CG3629 Dll Distal-less   20334   60E2-60E2   1   yes   yes   [no value] [no value]
FBgn0000166 CG1034 bcd bicoid   3636   84A5-84A5   6   yes   yes   [no value] [no value]
FBgn0000210 CG11491 br broad   50787   2B3-2B5   1   yes   yes   [no value] [no value]
FBgn0000251 CG1759 cad caudal   12408   38E9-38E10   1   yes   yes   [no value] [no value]
FBgn0000286 CG11924 Cf2 Chorion factor 2   6053   25B1-25B1   1   yes   yes   [no value] [no value]
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Description: Proteins for which a position weight matrix is available (Transfac, Dan Pollard's web site) or can easily be created (Noyes et al.: Homeobox specificities).

 List Info

Name:TFs for which a PWM is available
Date Created: 2009-09-21 16:36 BST
Type:Gene
Size:129 records

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Widgets displaying properties of 'TFs for which a PWM is available'  
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  2. Gene Ontology Enrichment | 
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  4. PFam Family Enrichment | 
  5. InterPro Protein Domain Enrichment | 
  6. Publication Enrichment | 
 
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Gene Ontology Enrichment

GO terms enriched for items in this list.
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Gene Ontology Enrichment - TF Background

GO terms enriched for genes in list. Restriction to positively curated TFs.
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PFam Family Enrichment

PFam annotated families enriched for genes in this list
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InterPro Protein Domain Enrichment

Protein Domains enriched for items in this list.
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Publication Enrichment

Publications enriched for genes in this list.
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Template results for 'TFs for which a PWM is available'     (expand all / collapse all )
The template queries below have been executed for this list. Use / to view or hide the templates.
- Genomics (Expand this section to view all 3 templates)
Gene --> GO terms and parents of those terms.
Gene --> Proteins.
Gene --> GO terms.

- Proteins (Expand this section to view all 1 templates)
Gene --> Proteins.


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