Transcription factor datamine for Drosophila melanogaster
A list of candidate transcription factors as established in Bart Deplancke's lab at EPFL.
Proteins for which a position weight matrix is available (Transfac, Dan Pollard's web site) or can easily be created (Noyes et al.: Homeobox specificities).
TFs for which REDfly holds information about the regulatory regions these proteins bind to.
Putative TFs based on the v1 release of FlyTF.
A list of experimentally verified TFs, definitive DNA-binding factors and predicted TFs with a canonical DNA-binding domain (excluding C2H2 zinc fingers).
A list of putative TFs, based on the presence of a putative DNA-binding domain (including C2H2 zinc fingers) and/or experimental evidence.
Transcription factors with experimental evidence for both DNA-binding and transcriptional regulatory function.
All proteins curated by the FlyTF/FlyBase curators. Candidate proteins were identified on the basis of a structural domain assignment (for a DNA-binding domain) or previous Gene Ontology annotation for a TF-related term.
Proteins (TF or non-TF) that the FlyTF curator thought to be involved in a chromatin-related process. This has not been thoroughly annotated but may serve as a hint for further investigation.
